基于RNAseq技术的肝细胞肝癌转录组学研究(7)

缩略词

RPM

RPKM 英文全称 reads per million reads reads per kilo bases per million reads 中文全称 每百万读段中来自于某基因的读段数 每百万读段中来自于某基

因每千碱基长度的读段数

BW转换 BWT Burrows-Wheeler transform

SMRT DNA-Seq

NNGS next-next-generation

SNP

ZMW zero-mode

HCC hepatocellular

DEG

DEE

SOM

PCA

SVM support

GO gene

CFTR cystic

CCDC50

SIGLEC11

CYP450 cytochrome

CGH comparative

TC

KEGG

COG

LOH

single molecule real time DNA sequencing sequencing single nucleotide polymorphism waveguides carcinoma differentially expressed gene differentially expressed exon self organizing map principle componet analysis vector machines ontology fibrosis transmembrane conductance regulator coiled-coil domain containing 50 sialic acid binding Ig-like lectin 11 P450 genomic hybridization tentative consensus sequences Kyoto Encyclopedia of Genes and Genomes clusters of orthologous groups of proteins loss of heterozygosity 单分子实时基因测序 下下代测序 单核苷酸多态性 零模式波导 肝细胞肝癌 差异表达基因 差异表达外显子 自组织图谱 主成分分析 支持向量器 基因本体论 囊性纤维化跨膜转运调节因子 — — 细胞色素450 比较基因组杂交 假设性一致序列 — 蛋白相邻类的聚簇 杂合缺失